Ich habe diese Datei:
Code: Alles auswählen
query | subject | query start | query end | subject start | Subject end
Locus_1 | tig00007234 | 1 | 1054 | 140511 | 137383
Locus_1 | tig00007234 | 1 | 1057 | 77478 | 74353
...
Code: Alles auswählen
def read_relationship(filename):
with open(filename) as f:
for line in f:
try:
parts = line.rstrip().split('|')
query_name = parts[0]
subject_name = parts[1]
query_start = parts[2]
query_end = parts[3]
subject_start = parts[4]
subject_end = parts[5]
except ValueError:
continue
Code: Alles auswählen
var data = [
[
source: {
id: 'Locus_1',
start: 1,
end: 1054
},
target: {
id: 'tig00007234',
start: 140511,
end: 137383
}
],
[
source: {
id: 'Locus_1',
start: 1,
end: 1057
},
target: {
id: 'tig00007234',
start: 77478,
end: 74353
}
],
...
];